Combining Pix4D and Drone Deploy in AGISOFT PHOTOSCAN

[Flamme]

Hi all,
I am flying a DJI Phantom 4 Pro and I have a problem with post-processing. There is a large set of photos (around 11 000) but half of them are taken with Pix4D mobile app, and the other half – with Drone Deploy. The problem occurs when I align photos with Agisoft Photoscan software. Is there somebody who successfully has combined images from both mobile applications? The problem is in vertical position.
Thank you in advance