Thanks for answering Karsten,
I've been working with metashape pro for many years now, but never came across this issue. I've always been using model /gradual selection and optimizing I've always done. But I just don't understand why I didn't see this problem earlier. So hence the confusion. I haven't used combining chunks very often up to now, what I'm using out editing for now. So masks it will be in the future.
btw I couln't reproduce your statement "it is the same for the step from the dense cloud to the model, where an edited dense cloud has no impact to the model (you will see the out edited parts in the model again)." Once out edited in dense cloud it stayed out edited in mesh. So confusion again, but this time it's the way I want it to be.
Thanks again
René