Hello,
I only checked your images and:
- You have a lot of dust in your images, be sure to check the "Exclude stationary tie points" in the alignment options to get rid of it
- The object support is reflective, not ideal.
- The object support changed at some point. Not ideal too.
You can try to split in some chunks pictures with the same object support and then align them. A bit of masking will help too.