Hello vtrugby,
I can suggest to switch camera type from Frame to Fisheye before aligning images, in case the images are taken with the ultra-wide angle lens.
As for the altitude values, DJI may be saving in EXIF above ground level, while PhotoScan expects height above ellipsoid. You can check the image files themselves, in the header they can store Reference Altitude and Absolute altitude values, but EXIF contains only one of the values.