Author Topic: Align chunks with subset of markers - is it possible? Could it be added?  (Read 1370 times)

Nick Durston

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Dear Alexey,

When aligning chunks, is it possible to choose which markers you want to use for the alignment? The current functionality assumes you use all available markers. But I would like to use a subset.

This would be a helpful feature for a future release if it's not currently possible. At the moment I am having to delete all markers that I don't want for the alignment. But it would be better not to have to do this.