Hello WarrenSchultz,
From the log I see that the GPU is used for the point detection and image matching:
2017-04-28 15:36:53 Detecting points...
2017-04-28 15:36:53 Using device: Ellesmere, 36 compute units, 8192 MB global memory, OpenCL 2.0
2017-04-28 15:36:53 max work group size 256
2017-04-28 15:36:53 max work item sizes [256, 256, 256]
2017-04-28 15:36:53 max mem alloc size 5952 MB
2017-04-28 15:36:53 wavefront width 64
2017-04-28 15:40:22 Selecting pairs...
2017-04-28 15:40:22 Using device: Ellesmere, 36 compute units, 8192 MB global memory, OpenCL 2.0
2017-04-28 15:40:22 max work group size 256
2017-04-28 15:40:22 max work item sizes [256, 256, 256]
2017-04-28 15:40:22 max mem alloc size 5952 MB
2017-04-28 15:40:22 wavefront width 64
2017-04-28 15:40:31 667194 matches found in 8.485 sec
2017-04-28 15:40:31 matches combined in 0.093 sec
2017-04-28 15:40:31 matches filtered in 0.36 sec
2017-04-28 15:40:31 3178 pairs selected in 0 sec
2017-04-28 15:40:31 Matching points...
2017-04-28 15:40:31 Using device: Ellesmere, 36 compute units, 8192 MB global memory, OpenCL 2.0
2017-04-28 15:40:31 max work group size 256
2017-04-28 15:40:31 max work item sizes [256, 256, 256]
2017-04-28 15:40:31 max mem alloc size 5952 MB
2017-04-28 15:40:31 wavefront width 64
The lines are not just marked with [GPU] prefix during Align Photos stage, even though the part of the operations are performed on GPU.