Hi Alex, thanks for your prompt reply.
Yes, I have processed all images together (multi-camera system). and I tried to process thermal alone. In both cases, I had the same issue (20% of the thermal images can be aligned and those are the ones on the field edge). For those images that have failed to align, they have numbers between 50 to 20 tie points for at least 4 to 5 images but all are classified as invalid and non as valid. Probably if we can make those invalid tie points as valid, we might be able to solve the problem, though I am not sure how much the quality will be compromised. For that field, I will not be worried much about the stitching quality as I will be looking for an average thermal value over large parts of the field.