Hi kirk,
Image stabilisation can cause issues with the camera calibration that is performed in PhotoScan Pro (and also other photogrammetry software packages), hence camera and lenses with such features should be avoided.
If you can, use additional lights to improve lighting conditions (e.g., I have used LED panels for a few projects, which worked really well).
Because image stabilisation is not recommended, you'll probably have to bump up your ISO. Modern cameras, however, don't produce much noise even at higher ISO values, hence you should be ok.
Instead of a tripod, try to use a monopod. It is easier to move around and to set up, and it helps you to stabilize your camera in order to get sharp imagery.
All the best.
Regards,
SAV