Hi,
Firstly, I would say that aerial survey well match with pole survey, which well match with ground survey. Indeed, angle of view very differ from aerial to ground point of view, which is the weak point of SIFT algorithm. Pole survey is then a good compromise to insure the 3D reconstruction.
After that, is order to acquire data of an area invisible from aerial point of view (like several hundreds of m² in the middle of a 20ha drone survey), I would flight all above the area, and acquire pictures with a pole under the mask (trees ?), while overflow the masked area so that a strip aroung the mask area would be mapped from pole and drone point of view.
Overlap of both aerial and pole surveys could be keep normal, like 80% front and 70% side.
Finally, I would suggest you to use check points both in area exclusively mapped by drone and area mapped with the pole (and masked for the drone), so that you could improve you survey process and figure out the accuracy of your 3D model.
Regards
P.S. Feel free to share your results and some screen shots of your project